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ped_stats()
Calculates a range of statistics of pedigrees
summary(<ped_stats> )
Post-processes output from ped_stats
h2_samp_var()
Calculates expected sampling variance of a given $h^2$ from the A matrix of a pedigree, based on the method of Visscher and Goddard 2015 Genetics
draw_ped()
Produce a graphical representation of a pedigree
draw_pedA()
Produce a graphical representation of the relatedness matrix of a pedigree
ggpedigree()
ggpedigree: Plotting tool for simple and complex pedigrees.
plot(<ped_stats> )
Plot output from ped_stats
convert_ped()
Converts a pedigree with individuals specified as factors to a numeric pedigree
fix_ped()
Manipulating pedigrees to prepare them for requirements of subsequent analyses Prepares a pedigree to conform with requirements of many softwares used in quantitative genetic analysis, as well as for many of the functions in pedtricks.
genome_sim()
A function to simulate QTL and/or SNP data.
micro_sim()
Simulates microsatellite data across a pedigree.
phen_sim()
A function to simulated phenotypic data
gryphons
Example dataset for pedtricks examples and tutorial
WarblerG
Seychelles Warbler Genotypes